Chin J Schisto Control ›› 2021, Vol. 33 ›› Issue (1): 35-.

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Genetic diversity of Sparganum isolates from snakes in Hunan Province based on mitochondrial nad4 and nad5 genes

GONG Teng-Fang, HE Jun-Lin, TAN Lei, XIE Li-Xing, LIU Wei*   

  1. College of Veterinary Medicine, Hunan Agricultural University, Changsha 410128, China
  • Online:2021-02-10 Published:2021-02-10

湖南省蛇源裂头蚴线粒体nad4nad5基因遗传多样性分析

龚腾芳,贺峻琳,谭磊,谢李星,刘伟*   

  1. 湖南农业大学动物医学院(长沙 410128)
  • 作者简介:龚腾芳,男,硕士研究生。研究方向:分子寄生虫学
  • 基金资助:
    湖南省财政厅农业专项养殖业项目(2130199)

Abstract: Objective To investigate the genetic diversity and phylogenetic relationship of Sparganum isolates from snakes in Hunan Province. Methods The partial mitochondrial NADH dehydrogenase subunit 4 (pnad4) and NADH dehydrogenase subunit 5 (pnad5) genes were amplified using a PCR assay in 7 Sparganum isolates from snakes in Hunan Province and the amplification product was sequenced. The homology and genetic evolution were investigated using the software DNAMAN 7.0, MegAlign, DnaSP 5.0 and MEGA 5.0. Results The pnad4 and pnad5 gene sequences were approximately 578 bp and 484 bp in length in the 7 Sparganum isolates from Hunan Province, and the percentages of genetic variations were 0 to 2.8% and 0 to 0.8%, respectively. There were 4 haplotypes detected in both the pnad4 and pnad5 genes, with global haplotype diversities of 0.810 ± 0.016 and 0.905 ± 0.011, nucleotide diversities of 0.006 ± 0.005 and 0.004 ± 0.003, and mean nucleotide variations of 3.960 and 1.905, respectively. Phylogenetic analysis showed that all 7 Sparganum isolates from snakes in Hunan Province were clustered into the same branch with Spirometra erinaceieuropaei isolates from different regions/hosts in the world, which belonged to S. erinaceieuropaei, which were close to Diphyllobothrium latum and far from other tapeworms. Conclusions There is a low genetic variation in snake?derived S. erinaceieuropaei isolates from Hunan Province, and both pnad4 and pnad5 genes may be potential molecular genetic markers for identification of S. erinaceieuropaei.

Key words: Snake?derived Spironmetra erinaceieuropaei, nad4 gene, nad5 gene, Phylogenetic analysis, Hunan Province

摘要: 目的 了解湖南省蛇源裂头蚴种群遗传多样性及其系统发生关系。方法 采用PCR技术扩增湖南省7株蛇源裂头蚴线粒体nad4基因和nad5基因部分序列(pnad4和pnad5),扩增产物测序后用DNAMAN 7.0、MegAlign、DnaSP 5.0和MEGA 5.0软件进行同源性和系统进化分析。结果 湖南省7株蛇源裂头蚴pnad4和pnad5基因序列长度分别约为578 bp和484 bp,其碱基变异率分别为0~2.8%和0~0.8%;均检测到4个单倍型,总单倍型多样性分别为0.810 ± 0.016和0.905 ± 0.011,核苷酸多样性分别为0.006 ± 0.005和0.004 ± 0.003,平均核苷酸差异为3.960和1.905。构建的系统进化树显示,7株裂头蚴分离株与来自不同地区或不同宿主的猬迭宫绦虫同在一个分支,属于猬迭宫绦虫;与阔节迭宫绦虫相隔较近,与其他绦虫相隔较远。结论 湖南省蛇源猬迭宫绦虫遗传变异程度低,pnad4基因和pnad5基因均可作为检测猬迭宫绦虫的分子遗传标记。

关键词: 蛇源裂头蚴, nad4基因, nad5基因, 种系发育关系, 湖南省

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